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Boot failure since 3.3-rc?

DISCUSSION Sune Mølgaard 3 participants 8 messages Apr 21, 2012 – May 19, 2012

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#0 lore raw

Hiya,

My old AMD Duron system (i386 with 2G RAM) has been unable to boot recent kernels, and I have bisected it down to:

commit 321bf4ed5ff5f7c62ef59f33b7eec5b154391f0a

Author: Yinghai Lu <[email protected]>
Date:   Mon Jan 30 13:57:12 2012 -0800

drivers/base/memory.c: fix memory_dev_init() long delay

One system with 2048g ram, reported soft lockup on recent kernel.

[snip the trace of the bug that this should fix]

Finally it takes about 55s to create 16400 memory entries.

Root cause: for x86_64, 2048g (with 2g hole at [2g,4g), and TOP2
will be 2050g), will have 16400 memory block.

find_memory_block/subsys_find_device_by_id will be expensive with
that many entries.

Actually, we don't need to find that memory block for BOOT path.

Skip that finding make it get back to normal.

[ 34.466696] cpu_dev_init done
[ 35.290080] memory_dev_init done

Also solved the delay with topology_init when sections_per_block is
not 1.

:040000 040000 95174f8192a2303d9e59e5f8523a58780b828e3e 2de57c6dc44872ac11766616f1cf05d6070b60de M drivers

Will be happy to test patches, but compilation is obviously slow on this machine, so some delay might occur.

Best regards,

Sune Mølgaard

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To err is human--and to blame it on a computer is even more so.
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#1 lore raw
Quoted 40 lines · Sune Mølgaard

Hiya,

My old AMD Duron system (i386 with 2G RAM) has been unable to boot recent kernels, and I have bisected it down to:

commit 321bf4ed5ff5f7c62ef59f33b7eec5b154391f0a
Author: Yinghai Lu <[email protected]>
Date:   Mon Jan 30 13:57:12 2012 -0800

   drivers/base/memory.c: fix memory_dev_init() long delay

   One system with 2048g ram, reported soft lockup on recent kernel.

[snip the trace of the bug that this should fix]

   Finally it takes about 55s to create 16400 memory entries.

   Root cause: for x86_64, 2048g (with 2g hole at [2g,4g), and TOP2 will be 2050g), will have 16400 memory block.

   find_memory_block/subsys_find_device_by_id will be expensive with that many entries.

   Actually, we don't need to find that memory block for BOOT path.

   Skip that finding make it get back to normal.

   [   34.466696] cpu_dev_init done
   [   35.290080] memory_dev_init done

   Also solved the delay with topology_init when sections_per_block is not 1.

Quoted 5 lines

:040000 040000 95174f8192a2303d9e59e5f8523a58780b828e3e 2de57c6dc44872ac11766616f1cf05d6070b60de M      drivers

Will be happy to test patches, but compilation is obviously slow on this machine, so some delay might occur.

So kernel with reverting that commit will work well?

can you post boot with "debug ignore_loglevel initcall_debug" with and without reverting that patch?

Thanks

Yinghai

#2 lore raw
Quoted 1 line · Yinghai Lu

So kernel with reverting that commit will work well?

Being new to reporting bisect results, I stupidly forgot to realise that this would be the final proof. Will report back when I know.

Quoted 2 lines

can you post boot with "debug ignore_loglevel initcall_debug" with and without reverting that patch?

Need to read up on netconsole as it's a headless machine. Would netconsole work through a switch, or would I need to find a cross-over cable?

Quoted 3 lines

Thanks

Yinghai

Thanks for replying. Will report back when I have something to share.

Best regards,

Sune

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#3 lore raw

Am 21.04.2012 23:22, schrieb Sune Mølgaard:

Quoted 3 lines

Need to read up on netconsole as it's a headless machine. Would netconsole work through a switch, or would I need to find a cross-over cable?

Netconsole works fine through a switch.

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Tilman Schmidt                    E-Mail: [email protected]
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#5 lore raw
In reply to Sune Mølgaard

Incidentally, I had to swap a wifi card, and bisecting now leads to a different bad commit(?)

This is what it says is the culprit now (I wonder if I should bisect again, and attempt booting maybe 3 or 4 times each time):

f94edacf998516ac9d849f7bc6949a703977a7f3 is the first bad commit commit f94edacf998516ac9d849f7bc6949a703977a7f3

Author: Linus Torvalds <[email protected]>
Date:   Fri Feb 17 21:48:54 2012 -0800

i387: move TS_USEDFPU flag from thread_info to task_struct

This moves the bit that indicates whether a thread has ownership of the FPU from the TS_USEDFPU bit in thread_info->status to a word of its own (called 'has_fpu') in task_struct->thread.has_fpu.

This fixes two independent bugs at the same time:

- changing 'thread_info->status' from the scheduler causes nasty problems for the other users of that variable, since it is
defined to
be thread-synchronous (that's what the "TS_" part of the naming was supposed to indicate).

So perfectly valid code could (and did) do

ti->status |= TS_RESTORE_SIGMASK;

and the compiler was free to do that as separate load, or and store instructions. Which can cause problems with preemption, since a
task
switch could happen in between, and change the TS_USEDFPU bit. The change to TS_USEDFPU would be overwritten by the final store.

In practice, this seldom happened, though, because the 'status'
field
was seldom used more than once, so gcc would generally tend to generate code that used a read-modify-write instruction and thus happened to avoid this problem - RMW instructions are naturally low fat and preemption-safe.

- On x86-32, the current_thread_info() pointer would, during
interrupts
and softirqs, point to a *copy* of the real thread_info, because x86-32 uses %esp to calculate the thread_info address, and thus the separate irq (and softirq) stacks would cause these kinds of odd thread_info copy aliases.

This is normally not a problem, since interrupts aren't supposed to look at thread information anyway (what thread is running at interrupt time really isn't very well-defined), but it confused the heck out of irq_fpu_usable() and the code that tried to squirrel away the FPU state.

(It also caused untold confusion for us poor kernel developers).

It also turns out that using 'task_struct' is actually much more
natural
for most of the call sites that care about the FPU state, since they tend to work with the task struct for other reasons anyway (ie scheduling). And the FPU data that we are going to save/restore is found there too.

Thanks to Arjan Van De Ven <[email protected]> for pointing us to the %esp issue.

:040000 040000 19548f49884c9745ecb3970321ff41b244d79b97 ec8b1a02dd7ef354f1be4c68767e4353819dd5fa M arch

For obvious reasons, this commit cannot be easily reverted, but help is much appreciated!

/sune

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#4 lore raw
In reply to Tilman Schmidt
Quoted 7 lines · Tilman Schmidt

Am 21.04.2012 23:22, schrieb Sune Mølgaard:

Quoted 3 lines

Need to read up on netconsole as it's a headless machine. Would netconsole work through a switch, or would I need to find a cross-over cable?

Netconsole works fine through a switch.

Thank you. If, as per my last post, the offending commit is instead about i387, my guess would be that the kernel hangs immediately, way before init'ing the NIC.

The machine is rather old, but if it has sufficient NVRAM, is there a way to log failures (perhaps via grub) to there, and then retrieve them when booting a known good kernel?

Best,

Sune

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#6 lore raw
In reply to Sune Mølgaard
Quoted 8 lines · Sune Mølgaard

Incidentally, I had to swap a wifi card, and bisecting now leads to a different bad commit(?)

This is what it says is the culprit now (I wonder if I should bisect again, and attempt booting maybe 3 or 4 times each time):

f94edacf998516ac9d849f7bc6949a703977a7f3 is the first bad commit commit f94edacf998516ac9d849f7bc6949a703977a7f3

Would anyone happen to know if this has been backported to the 3.0-series?

Just tried booting the latest ubuntu 11.10 kernel (based on 3.0) which also failed. That should, naturally, be logged with the Ubuntu guys (and it will be), but until then, if someone can positively say that the above patch was backported, it might lend credence to the assumption that it is indeed the culprit.

I have, btw., ordered a small display to hook up to the machine in order to see where it fails.

Will report back...

Best regards,

Sune Mølgaard

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#7 lore raw
In reply to Sune Mølgaard

Problem solved.

At some point between 3.3-rc3 and 3.3-rc4, something has made the uuids in /dev/disk/by-uuid/ different from the uuids that are embedded in md raid member v 0.90 metadata.

Failure at my end was caused by my adding (mdN) entries to /bot/grub/device.map at some time in the past, mapping them to the entries there.

Changing said entries to point to symlinks in /dev/disk/by-id solved this for me.

Problem was compunded by the use of initrd since, as one will readily surmise post-hoc, a kernel with no other problems will boot if the corresponding initrd image was built under a kernel with the old behaviour wrt. to /dev/disk/by-uuid mappings, thus prompting one to "git bisect good", whereas the kernel built while being booted in that kernel, with the initrd image being built under it will fail if it exhibits the new behaviour, leading to an off-by-one in the binary search of git bisect.

This mail is meant jointly as a "problem solved" message to this list, and as explanation for posterity if someone else happens to run into similar problems.

Initial confusion was mainly due to the lack of an attached monitor, the acquirement of which showed the eroor to be one of failure to mount the root fs, and even if that might have been seen via netconsole, I decided to order one before realising that some of the kernels would label my two ethernet cards differently than what udev picked up at one time and made permanent...

In closing: Thank you all for your input and sorry for the noise.

Best regards,

Sune Mølgaard

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